Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs13384539 | chr2:169748605 | C/T | 6.11E-13 | 214 | 5.08 | 12.05 | 16.73 | KM Plot |
KIRP | rs134027 | chr22:28047836 | A/G | 0.000111 | 214 | 12.1 | 15.12 | 16.43 | KM Plot |
KIRP | rs13426823 | chr2:202015677 | G/A | 0.000625 | 212 | 14.1 | 19.33 | 10.83 | KM Plot |
KIRP | rs1344329 | chr1:212724028 | G/A | 5.73E-9 | 209 | 16.43 | 17.2 | 11.03 | KM Plot |
KIRP | rs1345430 | chr16:4527961 | G/A | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
KIRP | rs1362625 | chr16:4526310 | G/C | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
KIRP | rs137901251 | chr16:20469807 | T/C | 0.000386 | 211 | 16.43 | 13.6 | 5.88 | KM Plot |
KIRP | rs138148364 | chr14:23723547 | AAAAACT/A | 5.87E-5 | 207 | 14.87 | 18.47 | 16.53 | KM Plot |
KIRP | rs138210209 | chr10:70705711 | TATTTA/T | 0.000426 | 211 | 14.87 | 18.77 | 6.25 | KM Plot |
KIRP | rs138234416 | chr6:27992898 | G/A | 4.74E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
KIRP | rs1382539 | chr5:79952154 | G/A | 0.000105 | 213 | 18.65 | 14.85 | 9.77 | KM Plot |
KIRP | rs1382540 | chr5:79952165 | C/G | 0.000117 | 214 | 8.62 | 14.83 | 19.3 | KM Plot |
KIRP | rs1382541 | chr5:79953484 | T/C | 0.000105 | 213 | 18.65 | 14.85 | 9.77 | KM Plot |
KIRP | rs1382542 | chr5:79953581 | T/C | 0.000124 | 211 | 18 | 14.83 | 9.77 | KM Plot |
KIRP | rs1382543 | chr5:79960955 | G/A | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |